03/08/2021: Andre Sim and Joseph Lee will present their work on proActiv and bambu at BioC2020, you can still register!
21/07/2021: Our manuscript describing xPore is published in Nature Biotechnology! Congratulations Ploy Pratanwanich, Yuk Kei Wan, Chen Ying and all collaborators! xPore is available on github, with detailed documentation. You can read the paper here
22/04/2021: New preprints from our group is online! You can read about the Singapore Nanopore Expression project here, the data is available through github. Congratulations to first author Chen Ying!
28/08/2020: Jonathan will present at the Victoria Cancer Bioinformatics Meeting (Australia), you can see the program here
28/07/2020: Congratulations Chen Ying for reeiving the Best Talk award in HiTSeq/ISMB 2020! Chen Ying presented about her method, bambu, for transcript discovery and quantification using Nanopore long read RNA-Seq data (https://github.com/GoekeLab/bambu)
26/06/2020:New Preprint from Ploy Pratanwanich about her method that enables the analysis of differential RNA modifications using direct RNA-Seq data: https://www.biorxiv.org/content/10.1101/2020.06.18.160010v1.full xPore is available through github page: https://github.com/GoekeLab/xpore you can read the documentation here
18/06/2020: Chen Ying and Ploy Pratanwanich will present their work on RNA modifications and transcript quantification at London Calling 2020. You can test their software on out github page: https://github.com/GoekeLab
26/03/2020: The DREAM Challenge paper on multiple myeloma risk prediction is published (you can read it here). Congratulations again to Christine and Jiayi from our group for winning this challenge and contributing the best performing predictor!
05/02/2020: The Pan Cancer Analysis of Whole Genomes (PCAWG) is published! Congratulations to everyone involved from our group, GIS and all international collaborators (see publications)
31/01/2020: Congratulations for winning the Genome Institute of Singapore graduate student prize Deniz!
13/01/2020: Deniz has prepared detailed supplementary tables for his manuscript (Demircioglu et al. (2019)). You can find the additional information here
05/11/2019: Jonathan presents at the Frontiers in Cancer Science meeting in Singapore
05/09/2019: Our first paper is published on the cover of Cell! Congratulations to the first author Deniz Demircioglu and everyone else who has contributed! You can read the article here.
